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Evolutionary Conserved Regions (ECRs) from whole-genome ECR Browser alignments.
Update (3/29/2008): We have recently modified ECR Browser alignments by including repetitive elements. All listed ECRs correspond to new ECR Browser alignments. Additionally, we annotated individual ECRs according to their relationship to RefSeq genes and repetitive elements (see annotation description at the bottom of the page).


Standard ECRs :: at least 100bps/70% identity
Base genomeSecondary genomeNumber of ECRsDateSizeFile
Human (hg18)
Macaque (rheMac2)80308402-25-200853.1Mbecrs.hg18rheMac2.txt.gz
Chimp (panTro2)36780603-24-200846.5Mbecrs.hg18panTro2.txt.gz
Mouse (mm9)248385501-08-200861.6Mbecrs.hg18mm9.txt.gz
Rat (rn4)210486001-08-200852.2Mbecrs.hg18rn4.txt.gz
Cow (bosTau3)336247402-18-200888.2Mbecrs.hg18bosTau3.txt.gz
Dog (canFam2)355703002-26-200894.0Mbecrs.hg18canFam2.txt.gz
Opossum (monDom4)73451402-24-200819.6Mbecrs.hg18monDom4.txt.gz
Chicken (galGal3)20665101-07-20085.3Mbecrs.hg18galGal3.txt.gz
Frog (xenTro2)11912101-08-20083.1Mbecrs.hg18xenTro2.txt.gz
Zebrafish (danRer5)19721102-07-20084.9Mbecrs.hg18danRer5.txt.gz
Fugu (fr2)6088201-07-20081.6Mbecrs.hg18fr2.txt.gz
Tetraodon (tetNig1)6174602-12-20081.6Mbecrs.hg18tetNig1.txt.gz
Macaque (rheMac2)
Human (hg18)71455402-26-200833.1Mbecrs.rheMac2hg18.txt.gz
Mouse (mm9)214498002-12-200849.3Mbecrs.rheMac2mm9.txt.gz
Rat (rn4)189574602-12-200843.8Mbecrs.rheMac2rn4.txt.gz
Cow (bosTau3)320910402-29-200875.4Mbecrs.rheMac2bosTau3.txt.gz
Dog (canFam2)338829202-12-200879.4Mbecrs.rheMac2canFam2.txt.gz
Opossum (monDom4)65646802-24-200816.3Mbecrs.rheMac2monDom4.txt.gz
Chicken (galGal3)19305702-12-20084.5Mbecrs.rheMac2galGal3.txt.gz
Frog (xenTro2)10160502-12-20082.4Mbecrs.rheMac2xenTro2.txt.gz
Zebrafish (danRer5)18700603-04-20084.3Mbecrs.rheMac2danRer5.txt.gz
Fugu (fr2)5376702-12-20081.3Mbecrs.rheMac2fr2.txt.gz
Tetraodon (tetNig1)5520003-04-20081.3Mbecrs.rheMac2tetNig1.txt.gz
Chimp (panTro2)
Human (hg18)42252403-26-200846.2Mbecrs.panTro2hg18.txt.gz
Mouse (mm9)242578802-05-200859.9Mbecrs.panTro2mm9.txt.gz
Rat (rn4)206027402-05-200850.9Mbecrs.panTro2rn4.txt.gz
Dog (canFam2)355781901-11-200893.7Mbecrs.panTro2canFam2.txt.gz
Opossum (monDom4)71819702-24-200819.0Mbecrs.panTro2monDom4.txt.gz
Chicken (galGal3)20142001-11-20085.2Mbecrs.panTro2galGal3.txt.gz
Frog (xenTro2)32114501-12-20088.7Mbecrs.panTro2xenTro2.txt.gz
Fugu (fr2)5517701-11-20081.5Mbecrs.panTro2fr2.txt.gz
Mouse (mm9)
Human (hg18)243094501-08-200861.5Mbecrs.mm9hg18.txt.gz
Macaque (rheMac2)231708101-08-200858.5Mbecrs.mm9rheMac2.txt.gz
Chimp (panTro2)239870701-08-200860.7Mbecrs.mm9panTro2.txt.gz
Rat (rn4)211193402-04-200879.1Mbecrs.mm9rn4.txt.gz
Dog (canFam2)177289501-08-200845.2Mbecrs.mm9canFam2.txt.gz
Opossum (monDom4)68733702-24-200818.8Mbecrs.mm9monDom4.txt.gz
Chicken (galGal3)20352701-08-20085.3Mbecrs.mm9galGal3.txt.gz
Frog (xenTro2)13105201-09-20083.4Mbecrs.mm9xenTro2.txt.gz
Zebrafish (danRer5)27073202-05-20087.3Mbecrs.mm9danRer5.txt.gz
Fugu (fr2)10925201-08-20082.9Mbecrs.mm9fr2.txt.gz
Rat (rn4)
Human (hg18)232552201-09-200858.3Mbecrs.rn4hg18.txt.gz
Macaque (rheMac2)221621902-28-200855.3Mbecrs.rn4rheMac2.txt.gz
Chimp (panTro2)228933702-06-200857.4Mbecrs.rn4panTro2.txt.gz
Mouse (mm9)199413302-11-200874.7Mbecrs.rn4mm9.txt.gz
Dog (canFam2)171985901-09-200843.3Mbecrs.rn4canFam2.txt.gz
Opossum (monDom4)71526602-24-200819.0Mbecrs.rn4monDom4.txt.gz
Chicken (galGal3)17834301-09-20084.3Mbecrs.rn4galGal3.txt.gz
Frog (xenTro2)12138201-09-20082.9Mbecrs.rn4xenTro2.txt.gz
Fugu (fr2)11219601-09-20082.8Mbecrs.rn4fr2.txt.gz
Cow (bosTau3)
Human (hg18)315464802-18-200873.8Mbecrs.bosTau3hg18.txt.gz
Macaque (rheMac2)313607502-29-200873.1Mbecrs.bosTau3rheMac2.txt.gz
Opossum (monDom4)97737702-27-200822.2Mbecrs.bosTau3monDom4.txt.gz
Chicken (galGal3)16433201-10-20084.0Mbecrs.bosTau3galGal3.txt.gz
Frog (xenTro2)8638901-10-20082.1Mbecrs.bosTau3xenTro2.txt.gz
Fugu (fr2)4903501-10-20081.2Mbecrs.bosTau3fr2.txt.gz
Dog (canFam2)
Human (hg18)327707702-26-200885.5Mbecrs.canFam2hg18.txt.gz
Macaque (rheMac2)327478101-10-200884.6Mbecrs.canFam2rheMac2.txt.gz
Chimp (panTro2)328188601-10-200885.9Mbecrs.canFam2panTro2.txt.gz
Mouse (mm9)148843601-10-200836.4Mbecrs.canFam2mm9.txt.gz
Rat (rn4)137378401-11-200833.6Mbecrs.canFam2rn4.txt.gz
Opossum (monDom4)63396502-24-200816.2Mbecrs.canFam2monDom4.txt.gz
Chicken (galGal3)18515501-10-20084.4Mbecrs.canFam2galGal3.txt.gz
Opossum (monDom4)
Human (hg18)91104302-21-200824.0Mbecrs.monDom4hg18.txt.gz
Macaque (rheMac2)87186702-24-200822.7Mbecrs.monDom4rheMac2.txt.gz
Chimp (panTro2)89022802-24-200823.3Mbecrs.monDom4panTro2.txt.gz
Mouse (mm9)69902102-24-200818.1Mbecrs.monDom4mm9.txt.gz
Rat (rn4)66462102-24-200817.2Mbecrs.monDom4rn4.txt.gz
Cow (bosTau3)80621402-22-200820.3Mbecrs.monDom4bosTau3.txt.gz
Dog (canFam2)87275802-22-200822.6Mbecrs.monDom4canFam2.txt.gz
Chicken (galGal3)23180002-22-20085.6Mbecrs.monDom4galGal3.txt.gz
Frog (xenTro2)12654702-22-20083.1Mbecrs.monDom4xenTro2.txt.gz
Zebrafish (danRer5)16211302-22-20083.7Mbecrs.monDom4danRer5.txt.gz
Fugu (fr2)6392902-21-20081.5Mbecrs.monDom4fr2.txt.gz
Tetraodon (tetNig1)6836902-22-20081.7Mbecrs.monDom4tetNig1.txt.gz
Chicken (galGal3)
Human (hg18)18633401-08-20084.6Mbecrs.galGal3hg18.txt.gz
Macaque (rheMac2)18136501-08-20084.5Mbecrs.galGal3rheMac2.txt.gz
Chimp (panTro2)18341401-08-20084.5Mbecrs.galGal3panTro2.txt.gz
Mouse (mm9)16134701-08-20084.0Mbecrs.galGal3mm9.txt.gz
Rat (rn4)15222201-08-20083.7Mbecrs.galGal3rn4.txt.gz
Cow (bosTau3)16133801-08-20083.9Mbecrs.galGal3bosTau3.txt.gz
Dog (canFam2)16790901-08-20084.1Mbecrs.galGal3canFam2.txt.gz
Opossum (monDom4)19362402-24-20084.8Mbecrs.galGal3monDom4.txt.gz
Frog (xenTro2)10401801-08-20082.5Mbecrs.galGal3xenTro2.txt.gz
Zebrafish (danRer5)4958101-08-20081.2Mbecrs.galGal3danRer5.txt.gz
Fugu (fr2)4606701-08-20081.1Mbecrs.galGal3fr2.txt.gz
Tetraodon (tetNig1)3841501-08-2008923.0kbecrs.galGal3tetNig1.txt.gz
Frog (xenTro2)
Human (hg18)10171401-09-20082.5Mbecrs.xenTro2hg18.txt.gz
Macaque (rheMac2)9622601-09-20082.3Mbecrs.xenTro2rheMac2.txt.gz
Chimp (panTro2)9835901-09-20082.4Mbecrs.xenTro2panTro2.txt.gz
Mouse (mm9)10081801-09-20082.4Mbecrs.xenTro2mm9.txt.gz
Rat (rn4)9474701-09-20082.3Mbecrs.xenTro2rn4.txt.gz
Cow (bosTau3)8627601-09-20082.1Mbecrs.xenTro2bosTau3.txt.gz
Opossum (monDom4)10578502-27-20082.6Mbecrs.xenTro2monDom4.txt.gz
Chicken (galGal3)10912201-09-20082.6Mbecrs.xenTro2galGal3.txt.gz
Zebrafish (danRer5)7145201-09-20081.8Mbecrs.xenTro2danRer5.txt.gz
Fugu (fr2)5896001-09-20081.4Mbecrs.xenTro2fr2.txt.gz
Tetraodon (tetNig1)4231401-09-2008993.5kbecrs.xenTro2tetNig1.txt.gz
Zebrafish (danRer5)
Human (hg18)11984502-07-20082.8Mbecrs.danRer5hg18.txt.gz
Macaque (rheMac2)10674203-04-20082.4Mbecrs.danRer5rheMac2.txt.gz
Mouse (mm9)14127302-27-20083.3Mbecrs.danRer5mm9.txt.gz
Opossum (monDom4)11618902-27-20082.7Mbecrs.danRer5monDom4.txt.gz
Chicken (galGal3)7524101-11-20081.7Mbecrs.danRer5galGal3.txt.gz
Frog (xenTro2)10179701-11-20082.4Mbecrs.danRer5xenTro2.txt.gz
Fugu (fr2)26464101-11-20086.3Mbecrs.danRer5fr2.txt.gz
Fugu (fr2)
Human (hg18)6373701-11-20081.5Mbecrs.fr2hg18.txt.gz
Macaque (rheMac2)5987801-11-20081.4Mbecrs.fr2rheMac2.txt.gz
Chimp (panTro2)5948701-11-20081.4Mbecrs.fr2panTro2.txt.gz
Mouse (mm9)7160801-11-20081.8Mbecrs.fr2mm9.txt.gz
Rat (rn4)6883601-11-20081.7Mbecrs.fr2rn4.txt.gz
Cow (bosTau3)6003101-11-20081.4Mbecrs.fr2bosTau3.txt.gz
Opossum (monDom4)5282202-27-20081.3Mbecrs.fr2monDom4.txt.gz
Chicken (galGal3)5697901-11-20081.3Mbecrs.fr2galGal3.txt.gz
Frog (xenTro2)4497001-11-20081.1Mbecrs.fr2xenTro2.txt.gz
Zebrafish (danRer5)15294301-11-20083.8Mbecrs.fr2danRer5.txt.gz
Tetraodon (tetNig1)33030201-11-20088.1Mbecrs.fr2tetNig1.txt.gz
Tetraodon (tetNig1)
Human (hg18)6420202-12-20081.6Mbecrs.tetNig1hg18.txt.gz
Macaque (rheMac2)6073203-04-20081.5Mbecrs.tetNig1rheMac2.txt.gz
Opossum (monDom4)5413202-27-20081.3Mbecrs.tetNig1monDom4.txt.gz
Chicken (galGal3)4158201-12-2008958.7kbecrs.tetNig1galGal3.txt.gz
Frog (xenTro2)3188201-12-2008744.3kbecrs.tetNig1xenTro2.txt.gz
Fugu (fr2)25596901-12-20086.3Mbecrs.tetNig1fr2.txt.gz


Core ECRs :: at least 350bps/77% identity
Base genomeSecondary genomeNumber of ECRsDateSizeFile
Human (hg18)
Macaque (rheMac2)39624602-25-200841.3MbcoreEcrs.hg18rheMac2.txt.gz
Chimp (panTro2)18258403-24-200840.3MbcoreEcrs.hg18panTro2.txt.gz
Mouse (mm9)22171701-08-20086.8MbcoreEcrs.hg18mm9.txt.gz
Rat (rn4)20323201-08-20086.2MbcoreEcrs.hg18rn4.txt.gz
Cow (bosTau3)68822402-18-200821.4MbcoreEcrs.hg18bosTau3.txt.gz
Dog (canFam2)81178202-26-200824.8MbcoreEcrs.hg18canFam2.txt.gz
Opossum (monDom4)7843402-24-20082.4MbcoreEcrs.hg18monDom4.txt.gz
Chicken (galGal3)2432001-07-2008690.8kbcoreEcrs.hg18galGal3.txt.gz
Frog (xenTro2)1029301-08-2008312.4kbcoreEcrs.hg18xenTro2.txt.gz
Zebrafish (danRer5)984202-07-2008278.9kbcoreEcrs.hg18danRer5.txt.gz
Fugu (fr2)239301-07-200877.8kbcoreEcrs.hg18fr2.txt.gz
Tetraodon (tetNig1)247802-12-200881.3kbcoreEcrs.hg18tetNig1.txt.gz
Macaque (rheMac2)
Human (hg18)38433102-26-200824.1MbcoreEcrs.rheMac2hg18.txt.gz
Mouse (mm9)19361702-12-20085.1MbcoreEcrs.rheMac2mm9.txt.gz
Rat (rn4)18527402-12-20084.9MbcoreEcrs.rheMac2rn4.txt.gz
Cow (bosTau3)61237102-29-200816.3MbcoreEcrs.rheMac2bosTau3.txt.gz
Dog (canFam2)72023002-12-200818.5MbcoreEcrs.rheMac2canFam2.txt.gz
Opossum (monDom4)7231902-24-20082.0MbcoreEcrs.rheMac2monDom4.txt.gz
Chicken (galGal3)2301902-12-2008592.3kbcoreEcrs.rheMac2galGal3.txt.gz
Frog (xenTro2)779102-12-2008209.6kbcoreEcrs.rheMac2xenTro2.txt.gz
Zebrafish (danRer5)812303-04-2008215.0kbcoreEcrs.rheMac2danRer5.txt.gz
Fugu (fr2)214802-12-200863.6kbcoreEcrs.rheMac2fr2.txt.gz
Tetraodon (tetNig1)233503-04-200870.8kbcoreEcrs.rheMac2tetNig1.txt.gz
Chimp (panTro2)
Human (hg18)24505003-26-200840.7MbcoreEcrs.panTro2hg18.txt.gz
Mouse (mm9)21700102-05-20086.6MbcoreEcrs.panTro2mm9.txt.gz
Rat (rn4)19858202-05-20086.0MbcoreEcrs.panTro2rn4.txt.gz
Dog (canFam2)80872601-11-200824.5MbcoreEcrs.panTro2canFam2.txt.gz
Opossum (monDom4)7693202-24-20082.3MbcoreEcrs.panTro2monDom4.txt.gz
Chicken (galGal3)2417101-11-2008685.0kbcoreEcrs.panTro2galGal3.txt.gz
Frog (xenTro2)6489801-12-20082.1MbcoreEcrs.panTro2xenTro2.txt.gz
Fugu (fr2)217801-11-200869.5kbcoreEcrs.panTro2fr2.txt.gz
Mouse (mm9)
Human (hg18)26875001-08-20088.7MbcoreEcrs.mm9hg18.txt.gz
Macaque (rheMac2)25189401-08-20088.0MbcoreEcrs.mm9rheMac2.txt.gz
Chimp (panTro2)26487801-08-20088.5MbcoreEcrs.mm9panTro2.txt.gz
Rat (rn4)96476302-04-200848.9MbcoreEcrs.mm9rn4.txt.gz
Dog (canFam2)20934801-08-20086.6MbcoreEcrs.mm9canFam2.txt.gz
Opossum (monDom4)4858002-24-20081.6MbcoreEcrs.mm9monDom4.txt.gz
Chicken (galGal3)1829901-08-2008524.3kbcoreEcrs.mm9galGal3.txt.gz
Frog (xenTro2)675201-09-2008197.5kbcoreEcrs.mm9xenTro2.txt.gz
Zebrafish (danRer5)3362002-05-20081.3MbcoreEcrs.mm9danRer5.txt.gz
Fugu (fr2)274301-08-200885.5kbcoreEcrs.mm9fr2.txt.gz
Rat (rn4)
Human (hg18)26984201-09-20088.5MbcoreEcrs.rn4hg18.txt.gz
Macaque (rheMac2)24982802-28-20087.7MbcoreEcrs.rn4rheMac2.txt.gz
Chimp (panTro2)26296102-06-20088.2MbcoreEcrs.rn4panTro2.txt.gz
Mouse (mm9)94900402-11-200847.4MbcoreEcrs.rn4mm9.txt.gz
Dog (canFam2)21081301-09-20086.5MbcoreEcrs.rn4canFam2.txt.gz
Opossum (monDom4)5027902-24-20081.6MbcoreEcrs.rn4monDom4.txt.gz
Chicken (galGal3)1700501-09-2008457.4kbcoreEcrs.rn4galGal3.txt.gz
Frog (xenTro2)652601-09-2008183.6kbcoreEcrs.rn4xenTro2.txt.gz
Fugu (fr2)276101-09-200884.9kbcoreEcrs.rn4fr2.txt.gz
Cow (bosTau3)
Human (hg18)70152102-18-200818.3MbcoreEcrs.bosTau3hg18.txt.gz
Macaque (rheMac2)64189002-29-200816.8MbcoreEcrs.bosTau3rheMac2.txt.gz
Opossum (monDom4)7885402-27-20082.2MbcoreEcrs.bosTau3monDom4.txt.gz
Chicken (galGal3)1987501-10-2008525.5kbcoreEcrs.bosTau3galGal3.txt.gz
Frog (xenTro2)598001-10-2008164.3kbcoreEcrs.bosTau3xenTro2.txt.gz
Fugu (fr2)189301-10-200859.8kbcoreEcrs.bosTau3fr2.txt.gz
Dog (canFam2)
Human (hg18)79942702-26-200823.4MbcoreEcrs.canFam2hg18.txt.gz
Macaque (rheMac2)72581701-10-200821.0MbcoreEcrs.canFam2rheMac2.txt.gz
Chimp (panTro2)79276501-10-200823.2MbcoreEcrs.canFam2panTro2.txt.gz
Mouse (mm9)16753601-10-20084.7MbcoreEcrs.canFam2mm9.txt.gz
Rat (rn4)15343201-11-20084.3MbcoreEcrs.canFam2rn4.txt.gz
Opossum (monDom4)7484602-24-20082.2MbcoreEcrs.canFam2monDom4.txt.gz
Chicken (galGal3)2163001-10-2008582.4kbcoreEcrs.canFam2galGal3.txt.gz
Opossum (monDom4)
Human (hg18)8466302-21-20082.6MbcoreEcrs.monDom4hg18.txt.gz
Macaque (rheMac2)8007702-24-20082.4MbcoreEcrs.monDom4rheMac2.txt.gz
Chimp (panTro2)8071002-24-20082.5MbcoreEcrs.monDom4panTro2.txt.gz
Mouse (mm9)4895402-24-20081.5MbcoreEcrs.monDom4mm9.txt.gz
Rat (rn4)4605102-24-20081.4MbcoreEcrs.monDom4rn4.txt.gz
Cow (bosTau3)7095602-22-20082.1MbcoreEcrs.monDom4bosTau3.txt.gz
Dog (canFam2)8251302-22-20082.5MbcoreEcrs.monDom4canFam2.txt.gz
Chicken (galGal3)2742102-22-2008732.0kbcoreEcrs.monDom4galGal3.txt.gz
Frog (xenTro2)890502-22-2008249.8kbcoreEcrs.monDom4xenTro2.txt.gz
Zebrafish (danRer5)533902-22-2008141.1kbcoreEcrs.monDom4danRer5.txt.gz
Fugu (fr2)284402-21-200876.5kbcoreEcrs.monDom4fr2.txt.gz
Tetraodon (tetNig1)249702-22-200876.0kbcoreEcrs.monDom4tetNig1.txt.gz
Chicken (galGal3)
Human (hg18)2275601-08-2008629.5kbcoreEcrs.galGal3hg18.txt.gz
Macaque (rheMac2)2202901-08-2008609.0kbcoreEcrs.galGal3rheMac2.txt.gz
Chimp (panTro2)2231701-08-2008616.7kbcoreEcrs.galGal3panTro2.txt.gz
Mouse (mm9)1659301-08-2008464.3kbcoreEcrs.galGal3mm9.txt.gz
Rat (rn4)1556601-08-2008433.3kbcoreEcrs.galGal3rn4.txt.gz
Cow (bosTau3)1931401-08-2008532.1kbcoreEcrs.galGal3bosTau3.txt.gz
Dog (canFam2)2026701-08-2008557.6kbcoreEcrs.galGal3canFam2.txt.gz
Opossum (monDom4)2582802-24-2008710.9kbcoreEcrs.galGal3monDom4.txt.gz
Frog (xenTro2)740301-08-2008205.4kbcoreEcrs.galGal3xenTro2.txt.gz
Zebrafish (danRer5)170501-08-200853.0kbcoreEcrs.galGal3danRer5.txt.gz
Fugu (fr2)156901-08-200849.7kbcoreEcrs.galGal3fr2.txt.gz
Tetraodon (tetNig1)134201-08-200840.9kbcoreEcrs.galGal3tetNig1.txt.gz
Frog (xenTro2)
Human (hg18)710701-09-2008199.2kbcoreEcrs.xenTro2hg18.txt.gz
Macaque (rheMac2)689201-09-2008190.5kbcoreEcrs.xenTro2rheMac2.txt.gz
Chimp (panTro2)700301-09-2008196.7kbcoreEcrs.xenTro2panTro2.txt.gz
Mouse (mm9)637201-09-2008176.1kbcoreEcrs.xenTro2mm9.txt.gz
Rat (rn4)606001-09-2008167.2kbcoreEcrs.xenTro2rn4.txt.gz
Cow (bosTau3)596201-09-2008164.6kbcoreEcrs.xenTro2bosTau3.txt.gz
Opossum (monDom4)800102-27-2008219.3kbcoreEcrs.xenTro2monDom4.txt.gz
Chicken (galGal3)777301-09-2008207.1kbcoreEcrs.xenTro2galGal3.txt.gz
Zebrafish (danRer5)630001-09-2008202.0kbcoreEcrs.xenTro2danRer5.txt.gz
Fugu (fr2)402601-09-2008121.4kbcoreEcrs.xenTro2fr2.txt.gz
Tetraodon (tetNig1)244901-09-200863.6kbcoreEcrs.xenTro2tetNig1.txt.gz
Zebrafish (danRer5)
Human (hg18)350202-07-2008106.0kbcoreEcrs.danRer5hg18.txt.gz
Macaque (rheMac2)278403-04-200884.7kbcoreEcrs.danRer5rheMac2.txt.gz
Mouse (mm9)385302-27-2008129.6kbcoreEcrs.danRer5mm9.txt.gz
Opossum (monDom4)354102-27-2008105.4kbcoreEcrs.danRer5monDom4.txt.gz
Chicken (galGal3)211201-11-200862.1kbcoreEcrs.danRer5galGal3.txt.gz
Frog (xenTro2)417401-11-2008120.3kbcoreEcrs.danRer5xenTro2.txt.gz
Fugu (fr2)1091901-11-2008340.2kbcoreEcrs.danRer5fr2.txt.gz
Fugu (fr2)
Human (hg18)230401-11-200871.0kbcoreEcrs.fr2hg18.txt.gz
Macaque (rheMac2)205401-11-200862.0kbcoreEcrs.fr2rheMac2.txt.gz
Chimp (panTro2)209701-11-200863.7kbcoreEcrs.fr2panTro2.txt.gz
Mouse (mm9)218001-11-200868.3kbcoreEcrs.fr2mm9.txt.gz
Rat (rn4)210901-11-200865.4kbcoreEcrs.fr2rn4.txt.gz
Cow (bosTau3)213601-11-200865.5kbcoreEcrs.fr2bosTau3.txt.gz
Opossum (monDom4)189102-27-200857.0kbcoreEcrs.fr2monDom4.txt.gz
Chicken (galGal3)202401-11-200857.7kbcoreEcrs.fr2galGal3.txt.gz
Frog (xenTro2)163101-11-200849.2kbcoreEcrs.fr2xenTro2.txt.gz
Zebrafish (danRer5)749801-11-2008244.1kbcoreEcrs.fr2danRer5.txt.gz
Tetraodon (tetNig1)11551001-11-20083.1MbcoreEcrs.fr2tetNig1.txt.gz
Tetraodon (tetNig1)
Human (hg18)239402-12-200874.5kbcoreEcrs.tetNig1hg18.txt.gz
Macaque (rheMac2)232103-04-200871.2kbcoreEcrs.tetNig1rheMac2.txt.gz
Opossum (monDom4)199702-27-200861.3kbcoreEcrs.tetNig1monDom4.txt.gz
Chicken (galGal3)152801-12-200843.8kbcoreEcrs.tetNig1galGal3.txt.gz
Frog (xenTro2)99101-12-200829.4kbcoreEcrs.tetNig1xenTro2.txt.gz
Fugu (fr2)10129401-12-20082.8MbcoreEcrs.tetNig1fr2.txt.gz


File format: <location1> <length1> <annotation> <percentIdentity> <location2>
Annotation format: Comma-separated list of region lengths and types within an ECR. Listed regions start at the first ECR position and completely span the ECR. These are non-overlapping regions. Type abbreviations: cds - coding, int - intronic, utr - UTR, rep - repeat, non - intergenic noncoding region.


NCBI DCODE.org Comparative Genomics Developments (www.dcode.org)